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Secure mode best practices for AI agents

Run your AI agent in secure mode the right way: read-only roots, explicit allowlists, logging, and the habits that make a locked-down agent usable.

Updated 2026-08-22Reading time 6 min

What secure mode gives you

Secure mode turns the agent read-only: it can inspect, plan and report, but it cannot change the system without your say-so. That single property removes most of the risk of an agent running unattended.

Start read-only, then add exceptions

  1. Enable secure mode before the agent does anything interesting.
  2. Let the first tasks fail loudly — each denial tells you what the agent actually needs.
  3. Add exceptions one by one, scoped as narrowly as possible.
  4. Re-run the same task and confirm only the allowed change happened.

Practices that keep it tight

  • Keep the workspace separate from anything you cannot afford to lose.
  • Treat every allowlisted path as a permanent decision — review it when the task is done.
  • Prefer explicit shell command allowlists over “allow everything”.
  • Watch the live logs during the first few runs of any new task.

Secure mode and scheduling

Unattended jobs need the strictest rules: a cron job running at 3 AM has nobody watching it. Keep scheduled agents read-only, cap their daily spend, and route any write through a manual approval step.

The mindset

Secure mode is not paranoia — it is the difference between “the agent read a file” and “the agent changed a file and nobody saw”. The audit trail records both; the policy decides which one is possible.